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Basm Allah Alrahman Alrahim
From BIOS but you must make password for BIOS ( but when any one remove motherboard CMOS battery he can get USB back )
From Windows use Group Policy ( also not the best restraction )
From Windows By Encription And put password to your windows ( its dangerus if you forget Encription Key or not save it in safe place ) or use bitlocker
you can put a password for your Hard Disk ( e.g Wistern Digital )
Altering registry values for USB Mass Storage Devices
Disabling USB Ports from Device Manager
By Un-installing the USB Mass Storage Drivers